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2019

Main publications

Aizarani N, Saviano A, Sagar, Mailly L Durand, Herman JS, Pessaux P, Baumert TF, Grün D. A human liver cell atlas reveals heterogeneity and epithelial progenitors. Nature. 2019 Aug;572(7768):199-204. doi: 10.1038/s41586-019-1373-2. Epub 2019 Jul 10.

Abernathy E, Mateo R, Majzoub K, van Buuren N, Bird SW, Carette JE, Kirkegaard K. Differential and convergent utilization of autophagy components by positive-strand RNA viruses. PLoS Biol. 2019 Jan 4;17(1):e2006926. doi:10.1371/journal.pbio.2006926. PMID: 30608919.

Zhuang X, Magri A, Hill M, Lai AG, Kumar A, Rambhatla SB, Donald CL, Lopez-Clavijo AF, Rudge S, Pinnick K, Chang WH, Wing PAC, Brown R, Qin X, Simmonds P, Baumert TF, Ray D, Loudon A, Balfe P, Wakelam M, Butterworth S, Kohl A, Jopling CL, Zitzmann N, McKeating JA. The circadian clock components BMAL1 and REV-ERBα regulate flavivirus replication. Nat Commun. 2019 Jan 22;10(1):377. doi: 10.1038/s41467-019-08299-7. PubMed PMID: 30670689.

Smits M, Zoldan K, Ishaque N, Gu Z, Fauvelle C, Neumann-Haefelin C, Baumert T, Emmerich F, Hofmann F, Conrad C, Thimme R, Boettler T. Clearance of chronic HCV infection leads to an expansion of a follicular T helper cell memory phenotype in HCV-specific CD4 T cells. Z Gastroenterol 2019; 57(01): e91. doi: 10.1055/s-0038-1677289.

Hamdane N*, Jühling F*, Crouchet E, El Saghire H, Thumann C, Oudot M, Bandiera S, Saviano A, Ponsolles C, Roca Suarez AA, Li S, Fujiwara N, Ono A, Davidson I, Bardeesy N, Schmidl C, Bock C, Schuster C, Lupberger J, Habersetzer F, Doffoël M, Piardi T, Sommacale D, Imamura M, Uchida T, Ohdan H, Aikata H, Chayama K, Boldanova T, Pessaux P, Fuchs BC, Hoshida Y, Zeisel MB, Duong FHT, Baumert TF. HCV-induced Epigenetic Changes Associated With Liver Cancer Risk Persist After Sustained Virologic Response. Gastroenterology. 2019 Mar 2. doi: 10.1053/j.gastro.2019.02.038. PMID: 30836093 . (*co-first author).

Verrier ER, Weiss A, Bach C, Heydmann L, Turon-Lagot V, Kopp A, El Saghire H, Crouchet E, Pessaux P, Garcia T, Pale P, Zeisel MB, Sureau C, Schuster C, Brino L, Baumert TF. Combined small molecule and loss-of-function screen uncovers estrogen receptor alpha and CAD as host factors for HDV infection and antiviral targets. Gut. 2019 Mar 4. doi: 10.1136/gutjnl-2018-317065. PMID: 30833451

Schwenzer H, Jühling F, Chu A, Pallett LJ, Baumert TF, Maini M, Fassati A. Oxidative stress triggers selective tRNA retrograde transport in human cells during integrated stress response. Cell reports (accepted in principle).